BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F06SP1|AL426715
(804 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1242 1577 0.0
3x_Contig81 183 7e-46
>3x_Contig1242
Length = 5614
Score = 1577 bits (795), Expect = 0.0
Identities = 803/805 (99%), Gaps = 1/805 (0%)
Strand = Plus / Plus
Query: 1 gatcaaaaggatcggaaaacaaagagggctaacccaacaccaagagcaggactcctgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2269 gatcaaaaggatcggaaaacaaagagggctaacccaacaccaagagcaggactcctgaac 2328
Query: 61 ttactaattgaataaacaagggaagtatatcttttccgggttctaatattgctcttactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2329 ttactaattgaataaacaagggaagtatatcttttccgggttctaatattgctcttactt 2388
Query: 121 cgcctgctatgtcaaccacaactacatctacgccatccagtgttgtcagcgctgttcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2389 cgcctgctatgtcaaccacaactacatctacgccatccagtgttgtcagcgctgttcaaa 2448
Query: 181 gtgctaccactacatctgctgatattgataacaactgctggggtctctcgtgttcctccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2449 gtgctaccactacatctgctgatattgataacaactgctggggtctctcgtgttcctccc 2508
Query: 241 actgggaatgggcacggtgggtaatattcgttatattcatgttcatcttactggcatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2509 actgggaatgggcacggtgggtaatattcgttatattcatgttcatcttactggcatttg 2568
Query: 301 tcatcactacgataagaataaactatataagaaggcgtaacggacaacaaccacttcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2569 tcatcactacgataagaataaactatataagaaggcgtaacggacaacaaccacttcgat 2628
Query: 361 acgtgtcatggctcactccgcccacataccgacaatcagaagctgtaagaaatagatcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2629 acgtgtcatggctcactccgcccacataccgacaatcagaagctgtaagaaatagatcag 2688
Query: 421 atgtcccattggcagattacgtgcctccgtacacagaagaagcaaatgaaaacgatttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2689 atgtcccattggcagattacgtgcctccgtacacagaagaagcaaatgaaaacgatttgg 2748
Query: 481 gttactacgatcgtgatgggatattccacgtgaacagtaaagccgaccctccaccaccga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2749 gttactacgatcgtgatgggatattccacgtgaacagtaaagccgaccctccaccaccga 2808
Query: 541 tagatgcgtatgtgctagagcatcgaaacgatagggatacggatatgatagatttggaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2809 tagatgcgtatgtgctagagcatcgaaacgatagggatacggatatgatagatttggaaa 2868
Query: 601 tgcaacggaccacggctacggcccagcaattgccggcatataatgatgtacctgaatcgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869 tgcaacggaccacggctacggcccagcaattgccggcatataatgatgtacctgaatcgg 2928
Query: 661 agactgtagaagcctctcgacaaaaccctgaatcagcccaacaacgacggtcatcatctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929 agactgtagaagcctctcgacaaaaccctgaatcagcccaacaacgacggtcatcatctg 2988
Query: 721 tgt-aamactaatccctgaagcaccggctgctacaaatctccggtgaaaacgtaatacaa 779
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2989 tgtcaacactaatccctgaagcaccggctgctacaaatctccggtgaaaacgtaatacaa 3048
Query: 780 gccattaaatgatcttcaacaaact 804
|||||||||||||||||||||||||
Sbjct: 3049 gccattaaatgatcttcaacaaact 3073
>3x_Contig81
Length = 1068
Score = 183 bits (92), Expect = 7e-46
Identities = 119/126 (94%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 681 caaaaccctgaatcagcccaac-aacgacggtcatcatctgtgt-aamactaatccctga 738
|||||||| | |||||||||| ||||||| ||||||||||||| || ||||||||||||
Sbjct: 580 caaaacccagtatcagcccaattaacgacgttcatcatctgtgtcaacactaatccctga 521
Query: 739 agcaccggctgctacaaatctccggtgaaaacgtaatacaagccattaaatgatcttcaa 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agcaccggctgctacaaatctccggtgaaaacgtaatacaagccattaaatgatcttcaa 461
Query: 799 caaact 804
||||||
Sbjct: 460 caaact 455
Score = 143 bits (72), Expect = 6e-34
Identities = 210/256 (82%)
Strand = Plus / Minus
Query: 329 aagaaggcgtaacggacaacaaccacttcgatacgtgtcatggctcactccgcccacata 388
||||||||| |||||||||||||||| ||| ||| | || ||| ||| ||||||||| |
Sbjct: 935 aagaaggcggaacggacaacaaccaccgcgagacgggccagggcgcaccccgcccacaga 876
Query: 389 ccgacaatcagaagctgtaagaaatagatcagatgtcccattggcagattacgtgcctcc 448
|||||||||||||| | |||||| ||| |||| |||||||||||||| ||| ||| ||
Sbjct: 875 ccgacaatcagaagggggaagaaagagaccagaggtcccattggcagaggacgggccccc 816
Query: 449 gtacacagaagaagcaaatgaaaacgatttgggttactacgatcgtgatgggatattcca 508
| |||||||||||||||| |||||||| ||| || |||| || || |||| | |||
Sbjct: 815 gaacacagaagaagcaaaggaaaacgaggggggggacgacgagcgggaggggagagccca 756
Query: 509 cgtgaacagtaaagccgaccctccaccaccgatagatgcgtatgtgctagagcatcgaaa 568
|| |||||| ||||||||||| |||||||||| ||| ||| | | || |||||| |||||
Sbjct: 755 cgggaacaggaaagccgacccgccaccaccgagagaggcgcaggggcgagagcaccgaaa 696
Query: 569 cgatagggatacggat 584
||| ||||| ||||||
Sbjct: 695 cgagagggagacggat 680
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4545
Number of Sequences: 1807
Number of extensions: 4545
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 2
length of query: 804
length of database: 10,358,551
effective HSP length: 16
effective length of query: 788
effective length of database: 10,329,639
effective search space: 8139755532
effective search space used: 8139755532
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)